Note
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EarthDaily Simulated Dataset
Following a pivot field
Import librairies
import datetime
import earthdaily
from dask.diagnostics import ProgressBar
from matplotlib import pyplot as plt
from earthdaily import datasets, EarthDataStore
ProgressBar().register() # to have chunks progress bar
Loading pivot
pivot = datasets.load_pivot_corumba()
Init earthdatastore with environment variables or default credentials
eds = EarthDataStore()
Define timerange
delta_days = 10
datetime_list = ["2018-10-01", "2019-04-15"]
Request items for vnir dataset
items = eds.search(
"earthdaily-simulated-cloudless-l2a-cog-edagro",
intersects=pivot,
datetime=datetime_list,
query={"instruments": {"contains": "vnir"}},
prefer_alternate="download",
)[::delta_days] # an keep on item every n delta_days
Generate datacube for RGB and NIR
datacube = earthdaily.earthdatastore.datacube(
items, intersects=pivot, assets=["blue", "green", "red", "nir"]
).load()
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Plot RGB image time series
datacube[["red", "green", "blue"]].ed.plot_rgb(
col="time", col_wrap=4, vmax=0.2
)
<xarray.plot.facetgrid.FacetGrid object at 0x7f71f8a91190>
Plot mean RGB time series
datacube[["blue", "green", "red", "nir"]].groupby("time").mean(...).to_array(
dim="band"
).plot(col="band")
<xarray.plot.facetgrid.FacetGrid object at 0x7f71fc3277d0>
Plot NDVI evolution
datacube["ndvi"] = (datacube["nir"] - datacube["red"]) / (
datacube["nir"] + datacube["red"]
)
fig, ax = plt.subplots()
mean_ndvi = datacube[["ndvi"]].groupby("time").mean(...).to_array(dim="band")
std_ndvi = datacube[["ndvi"]].groupby("time").std(...).to_array(dim="band")
ax.fill_between(
mean_ndvi.time,
(mean_ndvi.values + std_ndvi.values)[0, ...],
(mean_ndvi.values - std_ndvi.values)[0, ...],
alpha=0.3,
color="C1",
)
mean_ndvi.plot(ax=ax, c="C1")
plt.grid(alpha=0.4)
plt.title("NDVI evolution every 10 days")
Text(0.5, 1.0, 'NDVI evolution every 10 days')
Total running time of the script: (1 minutes 31.998 seconds)